Protein sequence optimization with a pairwise decomposable penalty for buried unsatisfied hydrogen bonds

Coventry, B; Baker, D

Baker, D (corresponding author), Univ Washington, Inst Prot Design, Seattle, WA 98195 USA.; Baker, D (corresponding author), Univ Washington, Dept Biochem, Seattle, WA 98195 USA.; Baker, D (corresponding author), Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA.

PLOS COMPUTATIONAL BIOLOGY, 2021; 17 (3):

Abstract

Author summary We present an algorithm that fits into existing protein design software that allows researchers to penalize unsatisfied polar atoms in ......

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